Load layouts from an PXL file — ReadMPX

Layouts can be pre-computed with the Pixelator data processing pipeline and are stored in a hive-styled partitioning in the PXL file. This function reads the layouts from the PXL file and returns them as a list. Use inspect_pxl_file to check the contents of a PXL file.

Usage

ReadMPX_layouts(
  filename,
  cells = NULL,
  graph_projection = c("bipartite", "Anode", "linegraph", "full"),
  verbose = TRUE
)

Arguments

filename: Path to a PXL file
cells: A character vector with component IDs. If NULL, all components are loaded.
graph_projection: The graph projection to load. Default is 'bipartite'. If multiple projections are present in the file, only the selected one is loaded.
verbose: Print messages

Value

A list of lists with the layouts. At the top level, the list is split by layout. At the second level, the list is split by component. The components are sorted in the order they appear in the PXL file.