PolarizationScores

Get and set polarization scores for a CellGraphAssay, CellGraphAssay5 or a Seurat object

Usage

PolarizationScores(object, ...)

PolarizationScores(object, ...) <- value

# S3 method for MPXAssay
PolarizationScores(object, ...)

# S3 method for MPXAssay
PolarizationScores(object, ...) <- value

# S3 method for Seurat
PolarizationScores(object, assay = NULL, meta_data_columns = NULL, ...)

# S3 method for Seurat
PolarizationScores(object, assay = NULL, ...) <- value

Arguments

object

An object with polarization scores

...

Not implemented

value

A tbl_df with polarization scores

assay

Name of a CellGraphAssay

meta_data_columns

A character vector with meta.data column names. This option can be useful to join meta.data columns with the polarization score table.

Value

PolarizationScores: Polarization scores

PolarizationScores<-: An object with polarization scores updated

See also

Other spatial metrics: ColocalizationScores()